- Hybrid CPU-GPU generation of the Hamiltonian and Overlap matrices in FLAPW methods
JHPCS'16.
4 October 2016.
- Cl1ck + LGen: FLAME for small scale linear algebra
BLIS Retreat 2016.
University of Texas at Austin, 19 September 2016.
- Cl1ck: A code generator for linear algebra kernels
Programming Languages Lunch Colloquium.
University of Texas at Austin, 12 September 2016.
We present Cl1ck, a code generator for specialized linear algebra kernels.
Cl1ck adopts the FLAME methodology for the derivation of formally correct
loop-based algorithms, and takes a three-stage approach: First, the input
operation is transformed into one or more Partitioned Matrix Expressions
(PMEs), i.e., a recursive definition of the operation; then, the PMEs are
decomposed to identify a family of loop invariants; finally, loop-based
algorithms are built around these loop invariants using formal methods
techniques. Different back-ends enable then the translation of the algorithms
into Matlab and optimized C code.
- OmicABEL: Story of a successful interdisciplinary collaboration
PASC Conference 14.
ETH Zürich, Zürich, Switzerland, June 2014.
- Knowledge-Based Automatic Generation of Algorithms and Code
Ph.D. Defense, Aachen, Germany, December 2013.
- Automating the Generation of Algorithms for Generalized Least-Squares Problems
The 6th European Congress on Computational Methods in Applied Sciences and Engineering (ECCOMAS 2012).
Vienna, Austria, September 2012.
- A Domain-Specific Compiler for Linear Algebra Operations
The 7th Intl Workshop on Automatic Performance Tuning (iWAPT), 10th Intl Meeting on High-Performance Computing for Computational Science (VECPAR 2012).
Kobe, Japan, July 2012.
- High-throughput Algorithms for Genome-Wide Association Studies
The 8th International Conference on Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB 2012).
Novosibirsk, Russia, June 2012.
- Sequences of Generalized Least-Squares for Genome-Wide Association Studies
The 83rd Annual Meeting of the International Association of Applied Mathematics and Mechanics (GAMM 2012).
Darmstadt, Germany, March 2012.
- Knowledge-Based Automatic Generation of Partitioned Matrix Expressions
The 13th International Workshop on Computer Algebra in Scientific Computing (CASC 2011).
Kassel, Germany, September 2011.
- Automatic Generation of Loop-Invariants for Matrix Operations
Workshop on Computer Algebra Systems and Their Applications (CASA), 11th International Conference on Computational Science and Its Applications (ICCSA 2011).
Santander, Spain, June 2011.
- Automatic Generation of Partitioned Matrix Expressions for Matrix Operations
Workshop on Automated computing, 8th International Conference of Numerical Analysis and Applied Mathematics (ICNAAM 2010)..
Rhodes, Greece, September 2010.
- Generation of Linear Algebra Algorithms for Automatic Differentiation
Workshop on Autotuning, 6th Parallel Matrix Algorithms and Applications (PMAA 2010).
Basel, Switzerland, June 2010.
